Long Stokes shift SOD for biomedical fluorescence imaging. (A) Chemical structure, molecular weight, max absorption, and emission wavelength, Stokes shift of typical commercial fluorescent dyes. (B) The absorption, fluorescence spectrum (left), chemical structure (middle), quantum yield, molar extinction coefficient (in water), computed isodensity surfaces of highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO), and cell imaging of the represent styrene oxazolone dye 9 (SOD9). (C) Triphenylphosphonium (TPP)–modified SOD9 for cell mitochondrial, in vivo head-neck cancer, and brain neuron imaging. a.u., arbitrary units; PI, post injection. Credit: Science Advances (2022). DOI: 10.1126/sciadv.abo3289

Fluorescence imaging can be conducted with long Stokes shift dyes that minimize crosstalk between the excitation source and fluorescent emission to improve the signal-to-background ratio. Regardless, researchers still form simple, small molecule dyes with large Stokes shift and near infrared emissions. In a new report now published in Science Advances, Hao Chen and a team of scientists developed a series of styrene oxazolone dyes (SODs) using simple synthetic methods inspired by the chromophore chemical structure of fluorescent proteins.

The dyes showed near-infrared emissions with long Stokes shift and small molecular weight. The most promising dyes also showed rapid renal excretion and passing properties. The bioengineers modified the compounds for tumor imaging, fluorescence image-guided surgery, neurosurgery and pathological analysis. The findings contribute an essential small molecular dye category to the classical dyes.

Developing long Stokes shift dyes

Fluorescence imaging is widespread in preclinical biomedical research, as well as clinical pathology and fluorescence image-guided surgery. The low cost, easy platform offers minor light damage to the biological specimen for high detection sensitivity. The biomedical application of fluorescent imaging depends on the dyes with critical features, including absorption/emission profiles, absorption coefficient, quantum yield, Stokes shift, and photochemical stability.

Nevertheless, only a few dyes have shown optimal properties across all categories. The heavy crosstalk between the excitation and emission light can result in relatively low signal-to-background ratio. As a result, biochemists aim to develop long Stokes shift near infrared dyes for high signal-to-background ratio. In this work, Chen and the team described the first high-efficiency styrene oxazolone dyes (SODs) as long stokes shift dyes, to provide a new strategy for in vivo fluorescence imaging.

Design and synthesis of SODs. (A) The chromophore chemical structures of GFP and RFP. (B) Synthesis of SODs (left) and the crystal structure of SOD10 (right). DIPEA, N,N-Diisopropylethylamine. (C) The chemical structures of SOD dyes. Ex., excitation; Em., emission; TICT, twisted intramolecular charge transfer; r.t., room temperature. Credit: Science Advances (2022). DOI: 10.1126/sciadv.abo3289

Experiments: Design, synthesis and characterization of styrene oxazolone dyes (SODs)

Fluorescence proteins are widely studied in biological research, where they share the same core skeleton of an imidazolinone moiety and an exocyclic double bond to switch between the dark and bright states. The researchers designed and synthesized a series of previously unreported dyes with styrene oxazolone as a fundamental skeleton via a simple procedure at room temperature for good yields within two hours. They characterized the chemical structure of SODs using standard 1H nuclear magnetic resonance (NMR) and high-resolution mass spectrometry spectra. The team identified the spectroscopic properties of the dyes in aqueous media, where they noted strong fluorescence with good photostability, due to the presence of an exocyclic double bond. The researchers derived the difference in spectroscopic properties from the electrical property and position of the substituents.

They thus showed how a variety of factors affected the optical properties of the SODs (styrene oxazolone dyes) and examined the cytotoxicity of the dyes thereafter. They followed these experiments with in vivo pharmacokinetics via fluorescence imaging, as well as in vivo applications of the dye for biomolecule labeling. The results showed how some probes targeting pathological conditions accumulated more in than in , to highlight their tumor-specific targeting properties.

Optical characteristics of SODs. The absorbance (A), fluorescence spectrum (B), and photostabilities (C) of SODs were measured in water with the concentration of 20, 12, and 10 μM, respectively (6G represents rhodamine 6G). (D) Density functional theory (DFT) optimized molecular orbital plots (HOMO and LUMO) of SOD9. (E) The optical properties summary of SOD dyes. Red is the maximum value, and blue is the minimum value of the same column. EtOH, ethanol. Credit: Science Advances (2022). DOI: 10.1126/sciadv.abo3289

Biocompatibility of the intravenous injection of the dye biomolecules

The researchers studied the biocompatibility of the dye after intravenous injection to a and investigated its effect on the internal organs via histology. The outcomes highlighted the possibility of using the new fluorescence probe to identify tumors and major organ fluorescence imaging. The work emphasized the best time for fluorescence image-guided tumor surgery to be 60 minutes post-injection and demonstrated how the fast brain accumulation of the dye briefly made it suitable for cranial nerve dynamic imaging. The outcomes highlighted the impact of the dye molecule for brain nerve dynamic monitoring for the first time.

SOD9’s in vivo pharmacokinetics by fluorescence imaging. (A) SOD9 fluorescence imaging in NIH-3T3 cell (red) and merge with the nuclear stains Hoechst (blue). Scale bars, 10 μm. (B) Whole-body NIR imaging of nude mice (n = 3, prone and supine positions) after intravenous injection of SOD9 (2.5 mg/kg, 6.18 μmol/kg). The signal was collected in the 650- to 800-nm channel with an excitation at 500 nm. (C) The colored imaging (top) and fluorescence imaging of the nude mice with urine excretion 1.5 hours after intravenous injection of SOD9. (D) Comparison of bladder fluorescent intensities at different time points after intravenous injection of SOD9. Error bars, means ± SD (n = 3). (E) Ex vivo imaging of the major organs dissected after euthanizing animals at 2 hours after intravenous injection of SOD9 (10 mg/kg). Left: colored picture; right: fluorescence imaging. (F) Comparison of mean intensities for the major organs at 2 hours after intravenous injection of SOD9. Error bars, means ± SD (n = 3). Credit: Science Advances (2022). DOI: 10.1126/sciadv.abo3289

Outlook

In this way, Hao Chen and colleagues designed and developed a series of oxazolone analogs and calculated their optimized geometry. The resulting dye analogs showed a lower bandgap to contribute to a larger Stokes shift approximating 150 to 200 nm greater than traditional fluorescence dyes. The substituents and steric hindrance effects played a key role in influencing the spectroscopic properties of the dyes. The outcomes indicated good optical and pharmacokinetic properties with high signal-to-background ratio, rapid clearance, and low toxicity. The molecules impressively crossed the blood-brain barrier after intravenous injection into mice to provide a strong fluorescence signal to visualize neurons via confocal fluorescence imaging in vivo.

SOD9-TPP for fluorescence image–guided surgery, brain neuroimaging, and on-site pathologic analysis. (A) Top: The colored picture of the orthotopic HNSCC mouse (SCC090; tumor marked with the red pentagram). Bottom left: The setup’s color photo of the confocal fluorescent endomicroscopy imaging–guided surgery. Bottom right: The setup’s colored photo of the confocal fluorescent endomicroscopy imaging of the resected tissue. (B) Confocal fluorescent endomicroscopy imaging of the dissected HNSCC tumor during fluorescence image–guided surgery of the mice 2 hours after intravenous injection of SOD9-TPP (5.0 mg/kg, 6.13 μmol/kg). Right, tumor; middle, tumor and normal tissue; left, normal tissue. (C) H&E staining of HNSCC tumor tissue sections. (D) The zoomed picture of (C). (E) The zoomed picture of (D). (F) Whole-body NIR imaging of nude mice (n = 3, prone and supine positions) after intravenous injection of SOD9-TPP (5.0 mg/kg, 6.13 μmol/kg); SOD9-TPP was found accumulated in the brain, BAT, and liver. (G) Different time points in vivo confocal fluorescent endomicroscopy imaging of brain neurons with the skull opened. Scale bars, 25 μm. (H) In vivo confocal fluorescent endomicroscopy imaging of major organs with abdomen and chest opened. Scale bars, 25 μm. Credit: Science Advances (2022). DOI: 10.1126/sciadv.abo3289

The team further modified the protocol to allow staining of mitochondria in living cells with applications across tumor imaging, fluorescence navigation surgery and confocal endoscopy to identify surgical boundaries and prevent surgical trauma. The new techniques facilitated the analysis of cell morphology in real time, which simplified the process of conventional histological examination with the additional capacity to replace traditional methods of staining such as Hematoxylin and Eosin as well. The dyes are a previously unreported compound that can be used for biomedical applications during -guided surgery, with promising properties including high quantum efficiency, low cytotoxicity, rapid excretion and .

More information: Hao Chen et al, Bioinspired large Stokes shift small molecular dyes for biomedical fluorescence imaging, Science Advances (2022). DOI: 10.1126/sciadv.abo3289

Guosong Hong et al, Near-infrared fluorophores for biomedical imaging, Nature Biomedical Engineering (2017). DOI: 10.1038/s41551-016-0010

Journal information: Nature Biomedical Engineering , Science Advances