How bacteria protect themselves from plasma treatment
Plasmas are created from gas that is pumped with energy. Today, plasmas are already used against multi-resistant pathogens in clinical applications, for example to treat chronic wounds. "Plasmas provide a complex cocktail of components, many of which act as disinfectants in their own right," explains Professor Julia Bandow, head of the RUB research group Applied Microbiology. UV radiation, electric fields, atomic oxygen, superoxide, nitric oxides, ozone, and excited oxygen or nitrogen affect the pathogens simultaneously, generating considerable stress. Typically, the pathogens survive merely several seconds or minutes.
In order to find out if bacteria, may develop resistance against the effects of plasmas, like they do against antibiotics, the researchers analysed the entire genome of the model bacterium Escherichia coli, short E. coli, to identify existing protective mechanisms. "Resistance means that a genetic change causes organisms to be better adapted to certain environmental conditions. Such a trait can be passed on from one generation to the next," explains Julia Bandow.
Mutants missing single genes
For their study, the researchers made use of so-called knockout strains of E. coli. These are bacteria that are missing one specific gene in their genome, which contains approximately 4,000 genes. The researchers exposed each mutant to the plasma and monitored if the cells kept proliferating following the exposure.
"We demonstrated that 87 of the knockout strains were more sensitive to plasma treatment than the wild type that has a complete genome," says Marco Krewing. Subsequently, the researchers analysed the genes missing in these 87 strains and determined that most of those genes protected bacteria against the effects of hydrogen peroxide, superoxide, and/or nitric oxide. "This means that these plasma components are particularly effective against bacteria," elaborates Julia Bandow. However, it also means that genetic changes that result in an increase in the number or activity of the respective gene products are more capable of protecting bacteria from the effects of plasma treatment.
Heat shock protein boosts plasma resistance
The research team, in collaboration with a group headed by Professor Ursula Jakob from the University of Michigan in Ann Arbor (U.S.), demonstrated that this is indeed the case: the heat shock protein Hsp33, encoded by the hslO gene, protects E. coli proteins from aggregation when exposed to oxidative stress. "During plasma treatment, this protein is activated and protects the other E. coli proteins—and consequently the bacterial cell," Bandow points out. An increased volume of this protein alone results in a slightly increased plasma resistance. Considerably stronger plasma resistance can be expected when the levels of several protective proteins are increased simultaneously.
Marco Krewing et al. The molecular chaperone Hsp33 is activated by atmospheric-pressure plasma protecting proteins from aggregation, Journal of The Royal Society Interface (2019). DOI: 10.1098/rsif.2018.0966