Page 4: Research news on Biological networks

Biological networks, as physical systems, comprise interconnected biomolecular or cellular components whose interactions give rise to emergent functional organization in living organisms. They include gene regulatory, protein–protein interaction, metabolic, neuronal, and signaling networks, each instantiated by tangible entities such as DNA, proteins, metabolites, or cells and their spatially constrained contacts. These systems exhibit nontrivial topology (e.g., modularity, hubs, motifs) and dynamic behavior governed by biochemical reaction kinetics, diffusion, and mechanical coupling. Biological networks underpin robustness, adaptability, and information processing in cells and tissues, and are quantitatively studied using tools from statistical physics, nonlinear dynamics, and network theory.

Foundation model reveals how cells are organized in tissues

Researchers at Helmholtz Munich and the Technical University of Munich (TUM) have developed Nicheformer, the first large-scale foundation model that integrates single-cell analysis with spatial transcriptomics. Trained on ...

Genome-scale metabolic model can increase potato yield

To study growth-defense trade-offs in the context of metabolism in crops, scientists from the Universities of Potsdam and Erlangen, Max Planck Institute of Molecular Plant Physiology, and the National Institute of Biology, ...

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