A new holographic microscope allows scientists to see through the skull and image the mouse brain

In order to scrutinize the internal features of a living organism using light, it is necessary to A) deliver sufficient light energy to the sample and B) accurately measure the signal reflected from the target tissue. However, in living tissues multiple scattering effects and severe aberration tend to occur when light hits the cells, which makes it difficult to obtain sharp images.

In complex structures such as living tissue, light undergoes multiple scattering, which causes the photons to randomly change their direction several times as they travel through the tissue. Because of this process, much of the image information carried by the light becomes ruined. However, even if it is a very small amount of reflected light, it is possible to observe the features located relatively deep within the tissues by correcting the wavefront distortion of the light that was reflected from the target to be observed. Still, the above-mentioned multiple scattering effects interfere with this correction process. Therefore, in order to obtain a high-resolution deep-tissue image, it is important to remove the multiple-scattered waves and increase the ratio of the single-scattered waves.

In 2019, the IBS researchers developed the high-speed time-resolved holographic microscope that can eliminate multiple scattering and simultaneously measure the amplitude and phase of light. They used this microscope to observe the neural network of live fish without incisional surgery. However, in the case of a mouse which has a thicker skull than that of a fish, it was not possible to obtain a neural network image of the brain without removing or thinning the skull, due to severe light distortion and multiple scattering occurring when the light travels through the bone structure.

The research team managed to quantitatively analyze the interaction between light and matter, which allowed them to further improve their previous microscope. In this recent study, they reported the successful development of a super-depth, three-dimensional time-resolved holographic microscope that allows for the observation of tissues to a greater depth than ever before.

Figure 1. Super-depth 3D holographic microscopeA super-depth 3D holographic microscope developed by researchers at the IBS Center for Molecular Spectroscopy and Dynamics. It is possible to observe the neural network of living organisms by increasing the target optical signal ratio and increasing the image acquisition speed and depth. Credit: Institute for Basic Science

Figure 2. Characteristics of the reflected signal according to the incident angle(A) If the object is small or has a linear structure, the waveform of the reflected signal of the single scattered waves remains similar even when the incident angle is changed. (B) However, the waveform of the reflected signal of the multiple-scattered waves changes without similarity even with a slight change in incident angle. Using these inter-wavefront properties, single scattering components and multiple scattering components can be separated from each other. Credit: Institute for Basic Science

Figure 3. A neural network in the brain of a living mouse was observed without removing the skull(A). The brain’s neural network was successfully imaged using a light source in the visible wavelength region. Only the skin of a living mouse was removed and the skull was left intact. (B) Using the previous technology, it was not possible to correct the complex aberration due to the severe multiple scattered waves generated in the skull, which makes it impossible to obtain any coherent image. (C) However, the algorithm developed by the research team allowed selective removal of multiple scattering components among the reflected signal, which allows the wavefront aberration to be corrected. (D) This allowed them to resolve the fine structure of neural fibers within the brain. E, F) High-resolution projection images visualize osteocytes inside the skull of the mouse, which flourish between bone layers and dura matters and G) neural network obtained by the microscope. Credit: Institute for Basic Science