Coupling deep transcriptome and metabolome analysis unveils thermotolerance in cool-season turfgrass

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Tall fescue (Festuca arundinacea Schreb.) is the predominant forage and cool-season perennial species in the U.S., China and several European countries, which grows at optimum temperature ranging from 18 to 25 oC.

High temperature damage impairs the growth of by inhibiting secondary metabolites. Little is known about the regulation pattern of the and carbohydrate metabolism at the whole-transcriptome level in tall fescue under high temperature stress.

In a study published in Ecotoxicology and Environmental Safety, the researchers form Molecular Breeding of Turfgrass and Forage Grass Group, Wuhan Botanical Garden of the Chinese Academy of Sciences, first analyzed the high temperature damage to fatty acids and in two tall fescue accessions, PI 234881 and PI 578718, by using coupling deep transcriptome and metabolome analysis.

Using RNA-Seq, 121 genes were induced during the second energy production phase in tall fescue exposed high-temperature conditions, indicating that there may be one energy-sensing system in cool-season turfgrass to adapt high-temperature conditions.

Using (GC-MS), the researchers found that the sugars and sugar alcohol accounted for more than 65.06% of the total 41 metabolites content and high-temperature elevated the rate to 82.89-91.16% in PI 578718.

High-temperature toxicity decreased the rate of fatty acid in the total 41 metabolites content and PI 578718 showed lower content than in PI 234881, which was attributed to the down-regulated genes in fatty acid biosynthesis pathway in tall fescue. Seven sugars, i.e., tagatose, psicose, lactulose, idose, allose (5TMS) BP, glucoheptose and inositol, and two fatty acids, i.e., octadecan-1-ol and octadecadienoic acid, showed more enrichment in PI 234881 than that in PI 578718 under heat stress.

The integration of deep transcriptome and metabolome analyses provides systems-wide datasets to further understand heat response in cool-season turfgrass.


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More information: Tao Hu et al. High temperature damage to fatty acids and carbohydrate metabolism in tall fescue by coupling deep transcriptome and metabolome analysis, Ecotoxicology and Environmental Safety (2020). DOI: 10.1016/j.ecoenv.2020.110943
Citation: Coupling deep transcriptome and metabolome analysis unveils thermotolerance in cool-season turfgrass (2020, September 29) retrieved 30 November 2020 from https://phys.org/news/2020-09-coupling-deep-transcriptome-metabolome-analysis.html
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