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                    <title>Phys.org news tagged with:rna genes</title>
            <link>https://phys.org/</link>
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            <description>Phys.org internet news portal provides the latest news on science including: Physics, Nanotechnology, Life Sciences, Space Science, Earth Science, Environment, Health and Medicine.</description>

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                    <title>DeepChopper model improves RNA sequencing research by mitigating chimera artifacts</title>
                    <description>Scientists in the laboratory of Rendong Yang, Ph.D., associate professor of Urology, have developed a new large language model that can interpret transcriptomic data in cancer cell lines more accurately than conventional approaches, as detailed in a recent study published in Nature Communications.</description>
                    <link>https://phys.org/news/2026-02-deepchopper-rna-sequencing-mitigating-chimera.html</link>
                    <category>Biotechnology</category>                    <pubDate>Mon, 09 Feb 2026 16:00:01 EST</pubDate>
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                    <title>Newly identified RNA molecule may drive cancer patient survival</title>
                    <description>In a recent study, researchers at the Texas A&amp;M University Health Science Center (Texas A&amp;M Health) identify a novel RNA molecule that plays a crucial role in preserving the integrity of a key cellular structure, the nucleolus . Their findings also suggest this molecule may influence patient survival in certain blood cancers. The work is published in the Proceedings of the National Academy of Sciences.</description>
                    <link>https://phys.org/news/2026-02-newly-rna-molecule-cancer-patient.html</link>
                    <category>Cell &amp; Microbiology</category>                    <pubDate>Mon, 02 Feb 2026 16:46:23 EST</pubDate>
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                    <title>Spider spinneret evolution: How a genome duplication event 438 million years ago set the stage</title>
                    <description>Scientists have uncovered a 400-million-year-old genetic secret that gave spiders the ability to produce silk and weave their webs. Spiders didn&#039;t begin their journey on Earth in the same way as they are known today. Arthropods such as our eight-legged weaver owe much of their evolutionary success to the slow, repeated modification of appendages. One of the crucial changes that allowed spiders to survive and diversify into more than 53,000 species was the spinnerets, a silk-spinning organ found on the underside of a spider&#039;s abdomen.</description>
                    <link>https://phys.org/news/2026-01-spider-spinneret-evolution-genome-duplication.html</link>
                    <category>Evolution</category>                    <pubDate>Fri, 30 Jan 2026 11:40:01 EST</pubDate>
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                    <title>Pressing pause: A small genetic stop may have helped complex life evolve</title>
                    <description>Humans have it. So does Drosophila. But not yeast. That &quot;it&quot; is a small pause at the start of gene activity—a brief molecular halt that may have helped life evolve from simple cells to complex animals.</description>
                    <link>https://phys.org/news/2025-12-small-genetic-complex-life-evolve.html</link>
                    <category>Evolution</category>                    <pubDate>Fri, 19 Dec 2025 13:13:16 EST</pubDate>
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                    <title>Exploring the connection between gene expression and aging</title>
                    <description>Northwestern Medicine scientists have discovered how molecular &quot;traffic controllers&quot; in cells influence aging and cellular senescence—a state where cells stop dividing but remain metabolically active. The study, published in Molecular Cell, sheds light on the process of transcribing DNA into RNA, a critical step in gene expression, and how it is tightly regulated and connected to age-related changes.</description>
                    <link>https://phys.org/news/2025-12-exploring-gene-aging.html</link>
                    <category>Cell &amp; Microbiology</category>                    <pubDate>Fri, 19 Dec 2025 11:46:27 EST</pubDate>
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                    <title>Chemists develop unique tool for studying RNA in live cells</title>
                    <description>An innovative three-color method for capturing images of mRNA inside live mammalian cells has been developed by UMass Amherst chemists. Because RNA is both incredibly important to human life and health and poorly understood, the ability to tag disparate RNA with different colors and watch them, in real time, as they do their work is a giant step forward in understanding one of life&#039;s basic building blocks.</description>
                    <link>https://phys.org/news/2025-12-chemists-unique-tool-rna-cells.html</link>
                    <category>Biochemistry</category>                    <pubDate>Wed, 17 Dec 2025 05:00:03 EST</pubDate>
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                    <title>Viruses help drive carbon cycling in deep-sea ecosystems, study reveals</title>
                    <description>A research team led by Prof. Sun Chaomin from the Institute of Oceanology of the Chinese Academy of Sciences (IOCAS) has unveiled the crucial role of viruses in deep-sea carbon cycling and microbial community structure. Their findings are published in Nature Communications.</description>
                    <link>https://phys.org/news/2025-12-viruses-carbon-deep-sea-ecosystems.html</link>
                    <category>Ecology</category>                    <pubDate>Tue, 09 Dec 2025 14:26:37 EST</pubDate>
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                    <title>Growing human organs for medical implants: New method gives human stem cells an edge in chimeric embryos</title>
                    <description>Scientists have discovered a method of helping human stem cells thrive in an animal embryo—a key development in efforts to grow human organs in animals for medical transplants.</description>
                    <link>https://phys.org/news/2025-11-human-medical-implants-method-stem.html</link>
                    <category>Cell &amp; Microbiology</category>                    <pubDate>Tue, 25 Nov 2025 12:44:32 EST</pubDate>
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                    <title>RNA &#039;editing&#039; process offers new clues to why some animals live longer</title>
                    <description>A collaborative study by scientists at the University of California, Riverside, and University of Southern California reports on how a process known as alternative splicing, often described as &quot;editing&quot; the genetic recipe, may help explain why some mammals live far longer than others.</description>
                    <link>https://phys.org/news/2025-11-rna-clues-animals-longer.html</link>
                    <category>Plants &amp; Animals</category>                    <pubDate>Mon, 24 Nov 2025 15:26:03 EST</pubDate>
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                    <title>World&#039;s oldest RNA extracted from woolly mammoth</title>
                    <description>Researchers from Stockholm University have—for the first time ever—managed to successfully isolate and sequence RNA molecules from Ice Age woolly mammoths. These RNA sequences are the oldest ever recovered and come from mammoth tissue preserved in the Siberian permafrost for nearly 40,000 years.</description>
                    <link>https://phys.org/news/2025-11-world-oldest-rna-woolly-mammoth.html</link>
                    <category>Molecular &amp; Computational biology</category>                    <pubDate>Fri, 14 Nov 2025 11:00:05 EST</pubDate>
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                    <title>Matching gene expression to metabolite production in single plant cells</title>
                    <description>A research team at the Max Planck Institute for Chemical Ecology has successfully combined single-cell RNA sequencing (scRNA-seq) and single-cell mass spectrometry (scMS) analysis on the same plant cell. This new approach allows researchers to directly correlate, at the cellular level, the expression of genes involved in producing natural products of interest with their occurrence and abundance.</description>
                    <link>https://phys.org/news/2025-10-gene-metabolite-production-cells.html</link>
                    <category>Plants &amp; Animals</category>                    <pubDate>Mon, 27 Oct 2025 12:41:04 EDT</pubDate>
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                    <title>Ants use a genetic &#039;bulldozer&#039; to achieve a hyper-specific sense of smell</title>
                    <description>Ants have evolved an acute sense of smell, which requires each sensory neuron to choose one scent receptor out of hundreds. In a new study published in Nature, researchers at New York University have discovered what ants use to solve this biological puzzle: a self-regulating system in which choosing one gene physically silences all its neighbors.</description>
                    <link>https://phys.org/news/2025-10-ants-genetic-bulldozer-hyper-specific.html</link>
                    <category>Evolution</category>                    <pubDate>Wed, 22 Oct 2025 11:00:01 EDT</pubDate>
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                    <title>Bridge recombinases, optimized for human cells, enable massive programmable DNA rearrangements</title>
                    <description>For decades, gene-editing science has been limited to making small, precise edits to human DNA, akin to correcting typos in the genetic code. Arc Institute researchers are changing that paradigm with a universal gene editing system that allows for cutting and pasting of entire genomic paragraphs, rearranging whole chapters, and even restructuring entire passages of the genomic manuscript.</description>
                    <link>https://phys.org/news/2025-09-bridge-recombinases-optimized-human-cells.html</link>
                    <category>Biotechnology</category>                    <pubDate>Thu, 25 Sep 2025 14:00:01 EDT</pubDate>
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                    <title>How harnessing the &#039;selfish gene&#039; could control harmful insect populations</title>
                    <description>New research is shining a light on one of genetics&#039; enduring puzzles—how the workings of the so-called &quot;selfish gene&quot; could be harnessed to control harmful insect populations. By understanding the molecular basis of a selfish gene and the way it operates, scientists believe they could identify novel methods to control certain insects that are globally significant pests and disease carriers.</description>
                    <link>https://phys.org/news/2025-09-harnessing-selfish-gene-insect-populations.html</link>
                    <category>Plants &amp; Animals</category>                    <pubDate>Thu, 18 Sep 2025 16:04:59 EDT</pubDate>
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                    <title>Computational method cuts through the noise to bring clarity to single-cell analysis</title>
                    <description>The world of cells is surprisingly noisy. Each cell carries unique genetic information, but when we try to measure cellular activity, signals can be lost or blurred, and differences between experiments can further obscure the data. These challenges have made it difficult for researchers to capture the true behavior of cells, especially when studying rare cell types or subtle changes that appear in the early stages of disease.</description>
                    <link>https://phys.org/news/2025-09-method-noise-clarity-cell-analysis.html</link>
                    <category>Cell &amp; Microbiology</category>                    <pubDate>Thu, 18 Sep 2025 13:12:56 EDT</pubDate>
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                    <title>New method tracks gene expression changes to reveal cell fate decisions</title>
                    <description>Essentially all cells in an organism&#039;s body have the same genetic blueprint, or genome, but the set of genes that are actively expressed at any given time in a cell determines what type of cell it will be and its function. How rapidly gene expression in a single cell changes over time can provide insight into how cells might become more specialized, but current measurement approaches are limited. A new method developed by researchers at Penn State and Yale University incorporates spatial information from the cell as well as data from cells processed at different times, improving researchers&#039; ability to understand the nuances of gene expression changes.</description>
                    <link>https://phys.org/news/2025-09-method-tracks-gene-reveal-cell.html</link>
                    <category>Molecular &amp; Computational biology</category>                    <pubDate>Sat, 06 Sep 2025 09:52:46 EDT</pubDate>
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                    <title>Previously unknown RNA chaperone guides assembly of key poxvirus protein complex</title>
                    <description>A study from Würzburg reveals that pox viruses have developed a unique strategy to rapidly multiply after infecting a host cell. The findings uncover a previously unknown role for a well-known molecule and may serve as a starting point for the development of new antiviral agents.</description>
                    <link>https://phys.org/news/2025-09-previously-unknown-rna-chaperone-key.html</link>
                    <category>Molecular &amp; Computational biology</category>                    <pubDate>Thu, 04 Sep 2025 16:58:05 EDT</pubDate>
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                    <title>AI tool targets RNA structures to unravel secrets of the dark genome</title>
                    <description>We mapped the human genome decades ago, but most of it is still a black box. Now, UNSW scientists have developed a tool to peer inside and what they find could reshape how we think about disease.</description>
                    <link>https://phys.org/news/2025-08-ai-tool-rna-unravel-secrets.html</link>
                    <category>Biotechnology</category>                    <pubDate>Fri, 29 Aug 2025 12:17:44 EDT</pubDate>
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                    <title>New foundational atlas spans the entire Arabidopsis life cycle</title>
                    <description>Serving as the representative plant species in most plant research across the last half century, Arabidopsis thaliana (thale cress) has revealed how plants respond to light, which hormones control plant behavior, and why some plants grow long, deep roots while others grow them shallow and wide. But despite its beloved reputation among plant biologists worldwide, many elements of the Arabidopsis life cycle have remained a mystery.</description>
                    <link>https://phys.org/news/2025-08-foundational-atlas-spans-entire-arabidopsis.html</link>
                    <category>Plants &amp; Animals</category>                    <pubDate>Tue, 19 Aug 2025 11:35:05 EDT</pubDate>
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                    <title>Scientists unravel long-standing mystery of ENOD40, a gene in legume nodulation research that marks nodule identity</title>
                    <description>A gene identified more than 30 years ago has now revealed its role as a natural microRNA (miRNA) sponge to fine-tune the legume nodulation pathway, thanks to an international collaboration led by Wageningen University and the Sainsbury Laboratory, Cambridge University. The paper is published in the journal Proceedings of the National Academy of Sciences.</description>
                    <link>https://phys.org/news/2025-08-scientists-unravel-mystery-enod40-gene.html</link>
                    <category>Molecular &amp; Computational biology</category>                    <pubDate>Tue, 19 Aug 2025 11:26:04 EDT</pubDate>
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                    <title>GHR motif discovery reveals new mechanism in plant miRNA processing</title>
                    <description>MicroRNAs (miRNAs) are tiny RNA molecules that regulate gene expression by controlling messenger RNAs (mRNAs) and are critical for various biological processes, including development, stress responses, and epigenetic regulation. In plants, the enzyme DICER-LIKE 1 (DCL1) processes miRNA precursors into mature miRNAs, and mutations in DCL1 can lead to developmental issues like delayed flowering and abnormal leaves, making its precision essential for plant growth.</description>
                    <link>https://phys.org/news/2025-08-ghr-motif-discovery-reveals-mechanism.html</link>
                    <category>Plants &amp; Animals</category>                    <pubDate>Thu, 14 Aug 2025 11:56:04 EDT</pubDate>
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                    <title>Discovery of a tRNA methyltransferase with an unusual domain architecture and functional features</title>
                    <description>All living organisms encode the amino acid sequences of proteins as nucleotide sequences (genetic information) in their genomic DNA. The genetic information is transcribed and subsequently translated into functional proteins.</description>
                    <link>https://phys.org/news/2025-07-discovery-trna-methyltransferase-unusual-domain.html</link>
                    <category>Molecular &amp; Computational biology</category>                    <pubDate>Fri, 18 Jul 2025 08:40:02 EDT</pubDate>
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                    <title>Evaluating the effect of liquid-handling speed on yeast growth using robots</title>
                    <description>In life science research involving cells, experiments are increasingly being conducted using robots. However, the impact of experimental parameters set for robots, such as the flow rate for aspirating and dispensing liquids (pipetting speed), on cells remains unclear.</description>
                    <link>https://phys.org/news/2025-07-effect-liquid-yeast-growth-robots.html</link>
                    <category>Biotechnology</category>                    <pubDate>Fri, 18 Jul 2025 08:20:03 EDT</pubDate>
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                    <title>The RNA revolution: How our understanding of life&#039;s blueprint is being rewritten</title>
                    <description>For decades, the central dogma of molecular biology—DNA makes RNA, RNA makes protein, protein makes phenotype—was the guiding framework for understanding inheritance and disease. This model explained classic Mendelian traits, such as how single DNA mutations in protein-coding regions could cause diseases like sickle cell anemia. Yet, this accounts for only about 2% of Mendelian inheritance and the resulting phenotypic changes.</description>
                    <link>https://phys.org/news/2025-07-rna-revolution-life-blueprint-rewritten.html</link>
                    <category>Molecular &amp; Computational biology</category>                    <pubDate>Thu, 10 Jul 2025 12:00:01 EDT</pubDate>
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                    <title>Scientists tackle single-cell data&#039;s reliability crisis with new tool &#039;scICE&#039;</title>
                    <description>The ability to analyze gene expression at the single-cell level—known as single-cell RNA sequencing (scRNA-seq)—has transformed life sciences, driving discoveries across immunology, oncology, and developmental biology. Over 40,000 studies have leveraged this technique to map the complex diversity of cells within tissues and organisms.</description>
                    <link>https://phys.org/news/2025-07-scientists-tackle-cell-reliability-crisis.html</link>
                    <category>Cell &amp; Microbiology</category>                    <pubDate>Thu, 03 Jul 2025 14:35:04 EDT</pubDate>
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                    <title>Two transparent worms shed light on evolution</title>
                    <description>Two species of worms have retained remarkably similar patterns in the way they switch their genes on and off despite having split from a common ancestor 20 million years ago, a new study finds.</description>
                    <link>https://phys.org/news/2025-06-transparent-worms-evolution.html</link>
                    <category>Evolution</category>                    <pubDate>Thu, 19 Jun 2025 14:00:11 EDT</pubDate>
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                    <title>New RNA test for African trypanosomiasis in livestock aids control efforts</title>
                    <description>Researchers have developed a new toolkit for detecting trypanosome parasites in livestock, aiding efforts to monitor and control the disease.</description>
                    <link>https://phys.org/news/2025-06-rna-african-trypanosomiasis-livestock-aids.html</link>
                    <category>Veterinary medicine</category>                    <pubDate>Tue, 17 Jun 2025 10:15:55 EDT</pubDate>
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                    <title>Imaging-based STAMP technique democratizes single-cell RNA research</title>
                    <description>Scientists at St. Jude Children&#039;s Research Hospital, the National Center for Genomic Analysis and the University of Adelaide have created a single-cell RNA analysis method that is 47 times cheaper and more scalable than other techniques.</description>
                    <link>https://phys.org/news/2025-06-imaging-based-technique-democratizes-cell.html</link>
                    <category>Cell &amp; Microbiology</category>                    <pubDate>Wed, 11 Jun 2025 16:02:01 EDT</pubDate>
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                    <title>Manipulating DNA repair proteins to improve gene editing outcomes</title>
                    <description>You may have seen it in the news recently: a baby in Pennsylvania with a rare genetic disorder was healed with a personalized treatment that repaired his specific genetic mutation. The treatment was created using a form of gene editing called base editing—a method created by Alexis Komor when she was a postdoctoral scholar in molecular biologist David Liu&#039;s group at Harvard University.</description>
                    <link>https://phys.org/news/2025-06-dna-proteins-gene-outcomes.html</link>
                    <category>Biotechnology</category>                    <pubDate>Wed, 04 Jun 2025 10:26:04 EDT</pubDate>
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                    <title>Biochemical method offers view into earliest stages of RNA production</title>
                    <description>When RNA molecules are synthesized by cells—a critical process in the creation of proteins and other cellular functions—they typically undergo a series of &quot;folding&quot; events that determine their structure and the role they will play in expressing genetic information in living organisms.</description>
                    <link>https://phys.org/news/2025-05-biochemical-method-view-earliest-stages.html</link>
                    <category>Biochemistry</category>                    <pubDate>Tue, 06 May 2025 09:29:04 EDT</pubDate>
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