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<title>Phys.org: Phys.Org news tagged with: gene sequence</title>
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<description>Phys.org internet news portal provides the latest news on science including: Physics, Nanotechnology, Life Sciences, Space Science, Earth Science, Environment, Health and Medicine.</description>

 <item>
     <title>How does inbreeding avoidance evolve in plants?</title>
   	 <description>Inbreeding is generally deleterious, even in flowering plants. Since inbreeding raises the risk that bad copies of a gene will be expressed, inbred progeny suffer from reduced viability.</description>
     <link>http://phys.org/news290094161.html</link>
	 <category>Biology</category>
	 <pubDate>Mon, 10 Jun 2013 14:42:48 EST</pubDate>
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     <title>How Archaea might find their food</title>
   	 <description>The microorganism Methanosarcina acetivorans lives off everything it can metabolize into methane. How it finds its sources of energy, is not yet clear. Scientists at the Ruhr-Universität Bochum together with colleagues from Dresden, Frankfurt, Muelheim and the USA have identified a protein that might act as a &quot;food sensor&quot;. They characterized the molecule in detail and found both similarities and differences to the system that is responsible for the search for food in bacteria.</description>
     <link>http://phys.org/news290084249.html</link>
	 <category>Chemistry</category>
	 <pubDate>Mon, 10 Jun 2013 11:57:38 EST</pubDate>
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     <title>Genome hints at markers for higher-producing, better-tasting chocolate</title>
   	 <description>The freshly sequenced genome of the most commonly cultivated cacao plant in the world is revealed in the open access journal Genome Biology this week. Researchers have utilised high quality DNA sequences to demonstrate the usefulness and quality of the sequence to identify genetic markers that can lead to higher yielding cocoa plants that still produce better tasting cocoa.</description>
     <link>http://phys.org/news289395659.html</link>
	 <category>Biology</category>
	 <pubDate>Sun, 02 Jun 2013 20:00:01 EST</pubDate>
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     <title>Team presents draft assembly of the Norway spruce genome sequence</title>
   	 <description>Swedish scientists have mapped the gene sequence of Norway spruce (the Christmas tree) – a species with huge economic and ecological importance - and that is the largest genome to have ever been mapped. The genome is complex and seven times larger than that of humans. The results have been published in the journal Nature.</description>
     <link>http://phys.org/news288445984.html</link>
	 <category>Biology</category>
	 <pubDate>Wed, 22 May 2013 13:00:01 EST</pubDate>
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     <title>A silky spin on protective armor</title>
   	 <description>At seven times the toughness of Kevlar, a silk produced by the Caerostris darwini spider of Madagascar is more robust than any other material—synthetic or natural. Most spider silks are about two times tougher than Kevlar, and have long been considered an intriguing alternative for bulletproof vests and other protective gear. There's only one problem: producing spider silk on demand is a tricky task.</description>
     <link>http://phys.org/news287649960.html</link>
	 <category>Chemistry</category>
	 <pubDate>Mon, 13 May 2013 07:46:11 EST</pubDate>
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     <title>Searching genomic data faster with new algorithm</title>
   	 <description>In 2001, the Human Genome Project and Celera Genomics announced that after 10 years of work at a cost of some $400 million, they had completed a draft sequence of the human genome. Today, sequencing a human genome is something that a single researcher can do in a couple of weeks for less than $10,000.</description>
     <link>http://phys.org/news261141702.html</link>
	 <category>Biology</category>
	 <pubDate>Tue, 10 Jul 2012 12:21:58 EST</pubDate>
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     <title>Direct transfer of plant genes from chloroplasts into the cell nucleus</title>
   	 <description>Chloroplasts, the plant cell's green solar power generators, were once living beings in their own right. This changed about one billion years ago, when they were swallowed up but not digested by larger cells. Since then, they have lost much of their autonomy. As time went on, most of their genetic information found its way into the cell nucleus; today, chloroplasts would no longer be able to live outside their host cell. Scientists in Ralph Bock's team at the Max Planck Institute of Molecular Plant Physiology have discovered that chloroplast genes take a direct route to the cell nucleus, where they can be correctly read in spite of their architectural differences.</description>
     <link>http://phys.org/news253539663.html</link>
	 <category>Biology</category>
	 <pubDate>Fri, 13 Apr 2012 12:45:34 EST</pubDate>
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     <title>First German genome comprehensively resolved at its molecular level</title>
   	 <description>Max Planck researchers analyze the two chromosome sets in the human genome separately for the first time.</description>
     <link>http://phys.org/news235062448.html</link>
	 <category>Biology</category>
	 <pubDate>Mon, 12 Sep 2011 16:08:23 EST</pubDate>
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     <title>Kinetochores prefer the 'silent' DNA sections of the chromosome</title>
   	 <description>The protein complex responsible for the distribution of chromosomes during cell division is assembled in the transition regions between heterochromatin and euchromatin.</description>
     <link>http://phys.org/news229085870.html</link>
	 <category>Biology</category>
	 <pubDate>Tue, 05 Jul 2011 11:58:17 EST</pubDate>
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     <title>Researchers identify caffeine-consuming bacterium</title>
   	 <description>As it turns out, humans aren't the only organisms that turn to caffeine for a pick-me-up. University of Iowa scientists have identified four different bacteria that actually can live on caffeine.</description>
     <link>http://phys.org/news226675354.html</link>
	 <category>Biology</category>
	 <pubDate>Tue, 07 Jun 2011 14:23:34 EST</pubDate>
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     <title>Identifying molecular guardian of cell's RNA</title>
   	 <description>When most genes are transcribed, the nascent RNAs they produce are not quite ready to be translated into proteins - they have to be processed first. One of those processes is called splicing, a mechanism by which non-coding gene sequences are removed and the remaining protein-coding sequences are joined together to form a final, mature messenger RNA (mRNA), which contains the recipe for making a protein.</description>
     <link>http://phys.org/news207217401.html</link>
	 <category>Biology</category>
	 <pubDate>Mon, 25 Oct 2010 09:23:44 EST</pubDate>
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     <title>Rare variants in gene coding may up risk of autoimmune disorders</title>
   	 <description>(PhysOrg.com) -- Rare variants in the gene coding of an enzyme that controls the activity of a key immune cell occur more often in people with autoimmune disorders like rheumatoid arthritis and type 1 diabetes, Harvard researchers at Massachusetts General Hospital found in a multi-institutional study.  The researchers' report, published in the journal Nature, identifies a pathway that could be a therapeutic target and may present a model for future studies of the role of rare gene variants in common disorders.</description>
     <link>http://phys.org/news197204464.html</link>
	 <category>Medicine &amp; Health</category>
	 <pubDate>Thu, 01 Jul 2010 12:01:27 EST</pubDate>
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<item>
     <title>New genetic analysis reveals principles of phenotypic expression</title>
   	 <description>The Human Genome Project, along with numerous parallel efforts to solve the DNA sequences of hundreds of animal, plant, fungal, and microbe genomes in the last few decades, has produced enormous amounts of genetic data with which researchers are struggling to keep pace. Knowing gene sequences, after all, may not directly reveal what roles that genes play in the actual manifestation of physical traits (or phenotypes) of an organism -- including their roles in human diseases. To help navigate the new genomic landscape, researchers are developing experimental approaches and analysis tools to help prioritize and organize complex genetic information with respect to phenotypic effects.</description>
     <link>http://phys.org/news196430728.html</link>
	 <category>Biology</category>
	 <pubDate>Tue, 22 Jun 2010 13:30:01 EST</pubDate>
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     <title>Enzyme Trio for Biosynthesis of Hydrocarbon Fuels</title>
   	 <description>(PhysOrg.com) -- Scientists with the Joint BioEnergy Institute have identified a trio of bacterial enzymes that can catalyze key steps in the conversion of plant sugars into hydrocarbon compounds for the production of green transportation fuels. </description>
     <link>http://phys.org/news196336883.html</link>
	 <category>Biology</category>
	 <pubDate>Mon, 21 Jun 2010 11:02:16 EST</pubDate>
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     <title>Defects in immune system enzyme may increase risk of autoimmune disorders</title>
   	 <description>A multi-institutional research team has found that rare variants in the gene coding an enzyme that controls the activity of a key immune cell occur more frequently in individuals with autoimmune disorders like rheumatoid arthritis and type 1 diabetes.  Their report, which will appear in the journal Nature and is receiving early online release, identifies a pathway that could be a therapeutic target and may present a model for future investigations of the role of rare gene variants in common disorders.</description>
     <link>http://phys.org/news195911215.html</link>
	 <category>Medicine &amp; Health</category>
	 <pubDate>Wed, 16 Jun 2010 13:00:07 EST</pubDate>
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     <title>A new approach that saves eyesight and lives in the developing world</title>
   	 <description>Two Agricultural Research Service (ARS) scientists are part of an international team that has found a way to boost the nutritional value of corn. This has the potential to reduce the number of children in developing countries who lose their eyesight, become ill or die each year because of vitamin A deficiencies.</description>
     <link>http://phys.org/news192110789.html</link>
	 <category>Biology</category>
	 <pubDate>Mon, 03 May 2010 13:20:01 EST</pubDate>
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</item>
<item>
     <title>Bacteria Are Better Gene Packers Than We Thought </title>
   	 <description>(PhysOrg.com) -- In microbial genomes, genes are typically depicted as linear series of separate regulatory and coding regions. This leads to the assumption that annotations done by computer to predict such arrangements completely describe the coding capacity of bacterial genomes. </description>
     <link>http://phys.org/news185182727.html</link>
	 <category>Biology</category>
	 <pubDate>Fri, 12 Feb 2010 08:10:02 EST</pubDate>
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<item>
     <title>Seeing how evolutionary mechanisms yield biological diversity</title>
   	 <description>An international team of scientists has discovered how changes in both gene expression and gene sequence led to the diversity of visual systems in African cichlid fish.</description>
     <link>http://phys.org/news180727170.html</link>
	 <category>Biology</category>
	 <pubDate>Tue, 22 Dec 2009 18:30:01 EST</pubDate>
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     <title>Immunity-Related Genes in Leafcutting Bee Uncovered</title>
   	 <description>(PhysOrg.com) -- The first analysis of immunity-related genes in a solitary bee has been conducted by Agricultural Research Service (ARS) scientists and cooperators.</description>
     <link>http://phys.org/news178792830.html</link>
	 <category>Biology</category>
	 <pubDate>Mon, 30 Nov 2009 08:50:01 EST</pubDate>
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	 <media:thumbnail url="http://cdn.physorg.com/newman/gfx/news/tmb/2009/immunityrela.jpg" width="90" height="61" />
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     <title>Termites? gut reactions show how to improve renewable fuel, researchers say</title>
   	 <description>(PhysOrg.com) -- Termite damage costs the U.S. more than $1 billion each year, but that same destructive power might help solve one of the nation’s most pressing economic quandaries: sustainable fuel production.</description>
     <link>http://phys.org/news176581694.html</link>
	 <category>Biology</category>
	 <pubDate>Wed, 04 Nov 2009 18:50:03 EST</pubDate>
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     <title>Ratchet-like genetic mutations make evolution irreversible</title>
   	 <description>(PhysOrg.com) -- A University of Oregon research team has found that evolution can never go backwards, because the paths to the genes once present in our ancestors are forever blocked.  The findings -- the result of the first rigorous study of reverse evolution at the molecular level -- appear in the Sept. 24 issue of Nature.</description>
     <link>http://phys.org/news172931418.html</link>
	 <category>Biology</category>
	 <pubDate>Wed, 23 Sep 2009 13:31:30 EST</pubDate>
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	 <media:thumbnail url="http://cdn.physorg.com/newman/gfx/news/tmb/2009/ratchetlikeg.jpg" width="90" height="134" />
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     <title>Systems Biology Reveals Diversity in Key Environmental Cleanup Microbe</title>
   	 <description>(PhysOrg.com) -- Researchers have completed the first thorough, system-level assessment of the diversity of an environmentally important genus of microbes known as Shewanella. Microbes belonging to that genus frequently participate in bioremediation by confining and cleaning up contaminated areas in the environment.</description>
     <link>http://phys.org/news170950956.html</link>
	 <category>Biology</category>
	 <pubDate>Mon, 31 Aug 2009 15:23:19 EST</pubDate>
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	 <media:thumbnail url="http://cdn.physorg.com/newman/gfx/news/tmb/2009/1-hiddendivers.jpg" width="90" height="60" />
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     <title>Researchers develop new, more-sensitive assay for detecting DNA methylation in colon cancer</title>
   	 <description>A study published in this week's online issue of Nature Biotechnology, demonstrates a unique and highly sensitive method for detecting methylation-associated cancers.</description>
     <link>http://phys.org/news169650435.html</link>
	 <category>Biology</category>
	 <pubDate>Sun, 16 Aug 2009 14:07:55 EST</pubDate>
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     <title>Study finds DNA barcoding requires caution without closer examination</title>
   	 <description>The goal of DNA barcoding is to find a simple, cheap, and rapid DNA assay that can be converted to a readily accessible technical skill that bypasses the need to rely on highly trained taxonomic specialists for identifications of the world's biota. This is driven by a desire to open taxonomic identifications to all user groups and by the short supply of taxonomists that do not even exist in many groups.</description>
     <link>http://phys.org/news165146706.html</link>
	 <category>Biology</category>
	 <pubDate>Thu, 25 Jun 2009 11:05:30 EST</pubDate>
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     <title>World first: Japanese scientists create transgenic monkeys</title>
   	 <description> In a controversial achievement, Japanese scientists announced on Wednesday they had created the world's first transgenic primates, breeding monkeys with a gene that made the animals' skin glow a fluorescent green.</description>
     <link>http://phys.org/news162649086.html</link>
	 <category>Biology</category>
	 <pubDate>Wed, 27 May 2009 13:18:36 EST</pubDate>
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     <title>A genomic CluE for cloud computing</title>
   	 <description>DNA sequencing is the next frontier in biological research. As new sequencing technology becomes more efficient and affordable, it is increasingly available to small laboratories.  Thus, sequencing data is being generated at a faster rate than ever before.</description>
     <link>http://phys.org/news159721281.html</link>
	 <category>Technology</category>
	 <pubDate>Thu, 23 Apr 2009 16:02:19 EST</pubDate>
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     <title>New Method Gives Regenerative Medicine a Boost</title>
   	 <description>(PhysOrg.com) -- Bioengineers at UC San Diego have developed a breakthrough method for sequencing-based methylation profiling, which could help fuel personalized regenerative medicine and even lead to more efficient and cost-effective methods for studying certain diseases.</description>
     <link>http://phys.org/news159643088.html</link>
	 <category>Biology</category>
	 <pubDate>Wed, 22 Apr 2009 18:19:15 EST</pubDate>
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	 <media:thumbnail url="http://cdn.physorg.com/newman/gfx/news/tmb/2009/newmethoddev.jpg" width="89" height="64" />
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     <title>Scientists hope to unlock mysteries of proteins</title>
   	 <description>Proteins, the work-horse molecules necessary for virtually every human action from breathing to thinking, have proved an almost ghostly presence, daring scientists to fully grasp their structure and behavior. Now, physicists at the University of Wisconsin-Milwaukee have developed powerful imaging techniques that promise to tell us much more about what proteins are and what they do, how they change shapes and how they work together in a cell.</description>
     <link>http://phys.org/news158941208.html</link>
	 <category>Physics</category>
	 <pubDate>Tue, 14 Apr 2009 15:20:32 EST</pubDate>
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