Genomic Analysis Indicates Mulitples Species of Killer Whale

Apr 22, 2010
Type-B “pack ice killer whale” from the Antarctic. Note the large eye-patch and two-tone gray color pattern. This type specializes in hunting seals, which are often on the ice and need to be knocked off the ice by the whales before they can be caught. Photo Credit: Bob Pitman, NOAA Southwest Fisheries Science Center

In a report published today in the journal Genome Research, scientists report finding strong genetic evidence supporting the theory there are several species of killer whales (Orcinus orca, also known as orcas) throughout the world's oceans.

Scientists have suspected for some time that there was more than one species of because of differences in behavior, feeding preferences and subtle physical features. But until now analysis has been inconclusive because of the inability to map the entire genetic picture, or genome, of the whales' mitochondria, an organelle within the cell inherited from the mother.

"The of mitochondria in killer whales, like other cetaceans, changes very little over time, which makes it difficult to detect any differentiation in recently evolved species without looking at the entire genome," said Phillip Morin, lead author and geneticist at NOAA's Southwest Fisheries Science Center in La Jolla, Calif. "But by using a relatively new method called, 'highly parallel sequencing' to map the entire genome of the cell's mitochondria from a worldwide sample of killer whales, we were able to see clear differences among the species."

In all, tissue samples from 139 killer whales were analyzed. Samples came from killer whales found in the North Pacific, the North Atlantic and oceans surrounding Antarctica. As a result of the study, two types of killer whales in the Antarctic that eat fish and seals, respectively, are suggested as separate species, along with mammal-eating "transient" killer whales in the North Pacific. Several other types of killer whales may also be separate species or subspecies, but additional analysis is required.

Highly parallel sequencing of DNA is far faster and less costly than historical methods of analysis. For instance, the examination of genome in one sample could have taken as long as several months. But with the use of high throughput sequencing, researchers can complete the same analysis for 50 or more samples in just a few weeks, and technology to sequence larger parts of the and more individuals continues to improve rapidly.

Determining how many of killer whales there are is critically important for resource managers to establish conservation priorities and to better understand the ecological role of this large and widespread predator in the world's oceans.

Explore further: Orchid named after UC Riverside researcher

More information: Morin PA, Archer FI, Foote AD, Vilstrup J, Allen EE, Wade P, Durban J, Parsons K, Pitman R, Li L, Bouffard P, Abel Nielsen SC, Rasmussen M, Willerslev E, Gilbert MTP, Harkins T. Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species. Genome Res, doi:10.1101/gr.102954.109

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