Artificial cells, simple model for complex structure

Feb 14, 2009
These are images of primitive artificial cell created with lipid membrane and two large molecules. Top images are when cells form. The bottom images are after fluid is removed via osmotic stress. The left images are by transmitted-light, Differential Interference Contrast microscopy. The images on the right are false colored fluorescent images. The scale bar is 10 micrometers. Credit: Christine Keating, Penn State

A simple, chemical materials model may lead to a better understanding of the structure and organization of the cell according to a Penn State researcher.

"Cells are interesting because they show organization even at the level of the cytoplasm, and while it is thought to be important for cell functions, it is not always clear how this organization is achieved," said Christine Keating, associate professor of chemistry. "We are taking a materials chemistry approach in developing simple experimental models for cytoplasm organization," she told attendees at the 2009 Annual Meeting of the American Association for the Advancement of Science.

Cytoplasm is the material that fills the cell and is crowded with very large molecules. It surrounds the organelles -- tiny organs like mitochondria and the nucleus. Unlike organelles, the cytoplasm is a fundamental feature of all cells. Many important biochemical processes take place here, and so cytoplasm is interesting as a major player in cell function.

Creating a cell with organelles would be a monumental task, but creating one that exhibits molecular crowding and heterogeneity -- unevenness of composition -- is possible using large polymeric molecules and a lipid membrane.

Keating uses lipids to create vesicles, tiny cell-sized bubbles of lipid membrane in an aqueous solution of two large polymers. In one case she used poly(ethyleneglycol) (PEG) -- a common polymer -- and dextran -- a polymerized sugar to create the cell.

"Neither of these compounds is important in a cell, but they illustrate the possibility of partitioning large molecules within a cell without internal membranes," said Keating. Cytoplasm is usually filled with macromolecules of proteins, nucleic acids and carbohydrates.

A mixture of a small amount of PEG, a small amount of dextran, water and dried lipid allowed the lipid to rehydrate and form the vesicles. The PEG and dextran filled the vesicles to the same concentration as the surrounding liquid. The lipid membrane encapsulated a mixture of PEG and dextran in water, but, the material separated to form two visibly distinct areas, one with a higher percentage of PEG and one with a higher percentage of dextran.

"The materials do not separate completely with one type of macromolecule in one section and the other completely apart," says Keating. "But the two aqueous phases are different enough that additional molecules, such as proteins or nucleic acids, prefer one over the other and will become concentrated there."

In bulk materials, researchers have been able to cause aqueous phase separation of up to 15 different compounds. Similar, multiple separations might even take place in a cell's cytoplasm. Biologists know that enzymes and other proteins tend to clump together or collocate in certain parts of the cell at certain times.

This collocalization would make the chemical reactions in metabolic pathways occur more rapidly because the chemicals necessary for the next step would be located nearby.

The application of heat, or a change in osmotic pressure can cause the separated materials to mix. However, upon cooling or reversion to the initial pressure, the materials again separate.

"It should be possible to collocalize materials in an artificial cell and then have the process be reversible," said Keating. "We could then bring together molecules we want at a certain time and separate them to control their activity."

Keating believes that some of the chemical reactions in cells may be controlled by collocation. If she can reproduce this type of collocation in her artificial cells, the systems can be more easily studied.

"The answer to whether or not collocalization can play this role is probably yes," said Keating. "However, proving it is not easy. With a simple reversible model system, we could test this idea and learn how large an effect is possible."

These primitive cells also model macromolecular crowding of cytoplasm, which happens because very large molecules, like proteins, are all competing for the same space. Macromolecules have long chains of atoms, sometimes branching and within their structures remains a lot of empty space. When faced with another large molecule, these macromolecules cannot occupy the same area and so they draw inward, filling some of the empty space and making themselves smaller.

Compacted macromolecules act differently than uncompacted molecules. The rates of reaction of crowded macromolecules can differ dramatically from those of the same molecules in unlimited space. These artificial cells with artificial cytoplasm may allow researchers to study the effects of macromolecular crowding in a controlled way.

The researchers are also looking at the effects of polarization and other types of compounds on these heterogeneous cells.

"One of the things we are looking into is how ions behave in the model cells," said Keating. "We want to take advantage of the effect common ions like potassium and magnesium can have on protein and nucleic acid structures and function."

These polymer containing primitive artificial cells may offer a very simple experimental system for investigating what goes on in the much more complex environment of biological cells.

Source: Penn State

Explore further: A refined approach to proteins at low resolution

add to favorites email to friend print save as pdf

Related Stories

White House backs use of body cameras by police

2 hours ago

Requiring police officers to wear body cameras is one potential solution for bridging deep mistrust between law enforcement and the public, the White House said, weighing in on a national debate sparked by the shooting of ...

Study urges 15-year plan for low-carbon growth

2 hours ago

The world can save both financial and environmental costs by shifting toward a low-carbon economy over the next 15 years, a high-level panel said Tuesday ahead of a UN summit.

Recommended for you

A refined approach to proteins at low resolution

21 hours ago

Membrane proteins and large protein complexes are notoriously difficult to study with X-ray crystallography, not least because they are often very difficult, if not impossible, to crystallize, but also because ...

Base-pairing protects DNA from UV damage

23 hours ago

Ludwig Maximilian University of Munich researchers have discovered a further function of the base-pairing that holds the two strands of the DNA double helix together: it plays a crucial role in protecting ...

Smartgels are thicker than water

Sep 19, 2014

Transforming substances from liquids into gels plays an important role across many industries, including cosmetics, medicine, and energy. But the transformation process, called gelation, where manufacturers ...

Separation of para and ortho water

Sep 18, 2014

(Phys.org) —Not all water is equal—at least not at the molecular level. There are two versions of the water molecule, para and ortho water, in which the spin states of the hydrogen nuclei are different. ...

User comments : 0