Pattern of brain-specific protein modifications is driven by the regulation of multiple enzymes

May 2, 2014
Figure 1: In the brain, epigenetic factors can increase expression of the enzyme GnT-IX to produce a specific glycosylation pattern (left), or block GnT-IX expression to prevent the same glycosylation process (right). Credit: Yasuhiko Kizuka, RIKEN–Max Planck Joint Research Center for Systems Chemical Biology

(Phys.org) —Many human proteins are modified by the attachment of short sugar chains called glycans. The patterns of attachment, or glycosylations, are known to be specific to organs, tissues and cell types, but the mechanisms regulating these patterns have been unclear. Naoyuki Taniguchi, Yasuhiko Kizuka and colleagues from the RIKEN–Max Planck Joint Research Center for Systems Chemical Biology have now clarified one such mechanism in the brain.

Glycosylation is mediated by glycosyltransferase enzymes. The researchers studied one of these enzymes called N-acetylglucosaminyltransferase-IX (GnT-IX), which is expressed only in the brain and is involved in demyelination—degradation of the insulation around neurons that helps them to conduct electrical signals. Understanding the regulation of GnT-IX could help in developing better knowledge of diseases such as multiple sclerosis.

As Kizuka explains, a closer look at the process regulating GnT-IX expression could also provide broader insight into glycosylation. "Expression of each glycosyltransferase enzyme in a specific tissue contributes to the phenomenon of tissue-specific glycosylation," he says. "Unveiling the mechanism of how GnT-IX is present only in the brain could lead to a general understanding of how are formed in a tissue-specific manner."

The team focused on a process known as epigenetics, in which is altered over time by modification of DNA and the histone proteins they are wrapped around. By manipulating expression of epigenetic factors in cultured brain cells and measuring the effect on GnT-IX expression, the researchers found that an enzyme called histone deacetylase 11 (HDAC11), which modifies histones near the GnT-IX gene, blocks expression of the GnT-IX . In contrast, enzymes called ten eleven translocase 3 (TET3) and O-GlcNAc transferase (OGT) increase expression of GnT-IX by recruiting a protein called NeuroD1, which triggers expression of the GnT-IX gene. The expression of enzymes similar to GnT-IX was unaffected, showing that this control mechanism is highly specific (Fig. 1).

"For the first time, we revealed the epigenetic mechanism underlying tissue-specific glycosylation," says Kizuka. "I expect that similar epigenetic mechanisms regulate other glycosylation-related genes, and analyzing the regulation of these genes will promote our understanding of glycosylation."

Kizuka also notes that it could be this epigenetic mechanism of GnT-IX regulation that goes wrong in the development of demyelination diseases. If similar mechanisms operate for other enzymes, there could be wider implications. "Defects in glycosylation often lead to severe disorders," he says. "Some of these diseases might be triggered by epigenetic dysregulation of -related genes."

Explore further: Modifications to chromosomal proteins help ensure that brain-specific sugars are produced only in appropriate tissues

More information: Kizuka, Y., Kitazume, S., Okahara, K., Villagra, A., Sotomayor, E. M. & Taniguchi, N. "Epigenetic regulation of a brain-specific glycosyltransferase N-acetylglucosaminyltransferase-IX (GnT-IX) by specific chromatin modifiers." Journal of Biological Chemistry 289, 11253–11261 (2014). DOI: 10.1074/jbc.M114.554311

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