How the same plant species can programme itself to flower at different times in different climates

Jul 16, 2012
How the same plant species can programme itself to flower at different times in different climates

(Phys.org) -- Researchers led by Professor Caroline Dean have uncovered the genetic basis for variations in the vernalization response shown by plants growing in very different climates, linking epigenetic mechanisms with evolutionary change.

Vernalization is a period of prolonged cold that some require before they will flower. This ensures that they only produce after the damaging cold of winter has passed. The plant must have a way of ‘remembering’ how much cold weather it has endured and in 2011 the researchers uncovered the mechanism plants use. When sufficient time in the cold has passed, an epigenetic switch silences a flowering-repressor gene called FLC. These epigenetic changes are then passed on to daughter cells during the rest of the plants developmental cycle.

Different plants have different vernalization requirements, as the length of winter cold they experience varies with geography and climate. In new research published in the journal Science, Professor Dean’s team have worked out how different plants set the level at which this epigenetic switch is triggered. They looked at a variety of Arabidopsis thaliana derived from North Sweden (Lov-1), and compared it to the reference ‘Columbia’ variety. Columbia needs 4 weeks of cold to trigger the epigenetic switch. The Lov-1 variety needs 9 weeks of cold to achieve the same, a natural variation to cope with the longer winters at northern latitudes.

They found variation in the genome sequence in and around the FLC gene itself. A combination of four genetic differences (polymorphisms) between the two varieties is responsible for the requirement for a longer period of cold. The polymorphisms affect chemical modifications to histone proteins which DNA is wrapped around. These modifications affect gene expression and are behind epigenetic memory. The four polymorphisms affect these modifications across the FLC gene so this points to how they are able to determine the switching point for the silencing of the gene.

More research is needed to determine exactly how these polymorphisms contribute to epigenetic memory, as the mechanism itself is still not fully understood. This plant model system is ideal for unpicking the intricacies of these mechanisms and how they apply across different organisms.

This research provides an explanation for how the level at which an epigenetic state switches itself is determined in response to a quantitative stimulus. This may be a general mechanism by which many other organisms adapt to changing environments. Arabidopsis has a wide geographical distribution, and adapting its vernalisation requirement in this way may have been key to helping it grow in different climates. As our own climate changes, we may be able to learn from the way Arabidopsis has adapted to help produce new crop varieties.

Explore further: Scientists sequence complete genome of E. coli strain responsible for food poisoning

More information: Quantitative Modulation of Polycomb Silencing Underlies Natural Variation in Vernalization, Vincent Coustham et al Science doi: 10.1126/science.1221881

Related Stories

Epigenetic 'memory' key to nature versus nurture

Jul 24, 2011

Researchers at the John Innes Centre have made a discovery, reported this evening (July 24) in Nature, that explains how an organism can create a biological memory of some variable condition, such as quality of nutrition or tem ...

Silence of the genes

Jul 22, 2011

A molecular mechanism by which gene silencing is regulated at the genome-wide level in plants has been uncovered by a research team led by Motoaki Seki of the RIKEN Plant Science Center, Yokohama, Japan. ...

Newly Cloned Gene Key to More Adaptable Wheat Varieties

Dec 05, 2006

In a research discovery that has practical implications for improving wheat varieties, a team of scientists at the University of California, Davis, and the U.S. Department of Agriculture have cloned a gene that controls the ...

Scientists clarify a mechanism of epigenetic inheritance

Apr 22, 2008

Although letters representing the three billion pairs of molecules that form the “rungs” of the helical DNA “ladder” are routinely called the human “genetic code,” the DNA they comprise transmits traits across ...

Plants display 'molecular amnesia'

Dec 02, 2008

(PhysOrg.com) -- Plant researchers from McGill University and the University of California, Berkeley, have announced a major breakthrough in a developmental process called epigenetics. They have demonstrated for the first ...

Recommended for you

Going to extremes for enzymes

19 hours ago

In the age-old nature versus nurture debate, Douglas Clark, a faculty scientist with Berkeley Lab and the University of California (UC) Berkeley, is not taking sides. In the search for enzymes that can break ...

User comments : 1

Adjust slider to filter visible comments by rank

Display comments: newest first

kevinrtrs
1 / 5 (7) Jul 17, 2012
linking epigenetic mechanisms with evolutionary change.

This is the usual equivocation: saying one thing regarding evolution [ in this case adaptation ] and subtly implying something completely different [ descend from one ancestor with modification to some totally new organism ].
This is the problem with the idea of evolution - there's no strict definition - it can mean anything one wants to at any point in time. Hence it cannot be falsified since it's so amenable to change(!) whenever the speaker becomes stressed to defend a previous understanding.