Saltwater crocodile breeders to benefit from genome sequence

Feb 14, 2012
Breeding of saltwater crocodiles is set to change now that scientists have completed the genome sequencing for the species 

(PhysOrg.com) -- The genome sequence of the saltwater crocodile has been completed by an international collaboration of scientists, including researchers from the University of Sydney.

The team from the University will develop information from the sequencing to perfect crocodile breeding techniques, a development of enormous potential benefit to the crocodile industry in Australia which is worth an estimated $8.8 million in exports.

"We had previously completed a genome map for the but this is a huge leap forward," said Professor Chris Moran from the University's Faculty of .

"Genome sequencing is the next step. The difference between genome mapping and genome sequencing is the difference between having a map of Australia on a single page and a detailed street directory."

Advances in DNA sequencing technology, so-called nextgen sequencing, have provided between one thousand and ten thousandfold reductions in cost, and comparable increases in the speed with which whole genome sequences can be generated.

"It cost many millions of dollars and many years of work by a huge international collaboration to produce the first in 2002," Professor Moran said.

"Now a can be produced for a complex organism for several thousands of dollars and in a relatively few months of work; this is what has been achieved with the finalisation of the saltwater crocodile genome sequence."

do not become sexually mature until they are seven years old which means that currently breeders have to wait that long before they can choose suitable breeding stock.

"The genome sequencing revolutionises that process," Professor Moran said.

"So the Darwin Crocodile Farm, one of our industry partners, will be able to take as soon as the crocodiles hatch and use them to decide which animals will be suitable for breeding."

"This is possible because the genome sequence identifies genetic 'markers' which provide information on the likely health and breeding quality of an animal."

Professor Moran worked on the with his University of Sydney colleague Dr. Jaime Gongora, PhD students Amanda Chong and Pauline Dalzell together with research affiliates (and former PhD students of the University), Dr. Sally Isberg and Dr Lee Miles.

They have been working on the genetics and genomics of farmed saltwater crocodiles since 2001 with funding from the Rural Industries Research and Development Corporation.

Other outcomes of the genome sequencing work include a better understanding of the evolutionary relationships among crocodylians, especially between the alligator family and crocodile family. It will also improve our understanding of crocodylians' relationships to other reptiles including their closest living relatives, the birds.

The research was recently outlined in an article in Genome Biology.

Explore further: Heaven scent: Finding may help restore fragrance to roses

Related Stories

Mapping the crocodile genome

Jul 28, 2009

The first ever genetic linkage map for a non-avian member of the Class Reptilia has been developed. Researchers writing in the open access journal BMC Genomics have constructed a first-generation genetic linkage map for th ...

Horse genome sequence draft is issued

Feb 07, 2007

The U.S.-led Horse Genome Sequencing Project has issued its first draft, making it available to biomedical and veterinary scientists around the world.

New genome sequencing targets announced

Jul 24, 2006

The U.S. National Human Genome Research Institute has announced several new sequencing targets, including the northern white-cheeked gibbon.

Human chromosome 3 is sequenced

Apr 27, 2006

The sequencing of human chromosome 3 at Baylor College represents the final stage of a multi-year project to sequence the human genome.

Recommended for you

Study on pesticides in lab rat feed causes a stir

Jul 02, 2015

French scientists published evidence Thursday of pesticide contamination of lab rat feed which they said discredited historic toxicity studies, though commentators questioned the analysis.

International consortium to study plant fertility evolution

Jul 02, 2015

Mark Johnson, associate professor of biology, has joined a consortium of seven other researchers in four European countries to develop the fullest understanding yet of how fertilization evolved in flowering plants. The research, ...

Making the biofuels process safer for microbes

Jul 02, 2015

A team of investigators at the University of Wisconsin-Madison and Michigan State University have created a process for making the work environment less toxic—literally—for the organisms that do the heavy ...

Why GM food is so hard to sell to a wary public

Jul 02, 2015

Whether commanding the attention of rock star Neil Young or apparently being supported by the former head of Greenpeace, genetically modified food is almost always in the news – and often in a negative ...

The hidden treasure in RNA-seq

Jul 01, 2015

Michael Stadler and his team at the Friedrich Miescher institute for Biomedical Research (FMI) have developed a novel computational approach to analyze RNA-seq data. By comparing intronic and exonic RNA reads, ...

User comments : 1

Adjust slider to filter visible comments by rank

Display comments: newest first

Shifty0x88
5 / 5 (1) Feb 14, 2012
Wow, that is pretty cool. I don't know why we want to create more of the most dangerous croc in the world, but if it's for profits well I guess it has been decided then.

Seriously though, don't create a mega-croc for more meat and then have it escape and breed in the wild. At least make them sterile first

Please sign in to add a comment. Registration is free, and takes less than a minute. Read more

Click here to reset your password.
Sign in to get notified via email when new comments are made.