Researchers unlock bacteria's beneficial side

November 28, 2011

Researchers now understand how bacteria can break down phosphonic acids, persistent and potentially hazardous environmental pollutants found in many common medicinal products, detergents and herbicides.

"We've achieved a critical step that has evaded other research groups for nearly 50 years," says David Zechel, a professor in the Department of Chemistry and an expert in . "Having successfully identified the proteins that are needed to break down these molecules, we can finally examine how this reaction actually works and engineer specialized bacteria in the lab to render these compounds harmless."

The stability of phosphonic acids means that these compounds do not easily break down in nature. However, certain bacteria manage to break down these bonds in related molecules with surprising ease. The team successfully identified a complex of proteins that is believed to perform the key bond-breaking step.

It is estimated that more than 20,000 tonnes of phosphonic acids are released annually into the environment in the Western Hemisphere. Many of these end up as contaminants in groundwater, leading to concern over their impact on human health and aquatic life.

This research was conducted by Queen's Chemistry graduate student Fern R. McSorley in collaboration with Bjarne Jochimsen (Department of , Aarhus University) and Bjarne Hove-Jensen (Department of Biology, University of Copenhagen).

The findings were recently published in the .

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Shoe
Nov 29, 2011

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A few more details seeing as the article is a little light:

Phosphonates have direct carbon-phosphorous bonds in them instead of the more common carbon-oxygen-phosphorous group. They have very different chemical properties to phosphates and are impossible for many organisms to break down.

There are 4 known systems for degrading them. The one which is most widespread and has been known for the longest is the C-P lyase system. It has cleaved the C-P bond of pretty much every phosphonate tested, whereas the other systems are restricted to just one substrate. Getting in vitro activity has been impossible so far, so it is also the least understood.

Zechel et al. have determined which parts of the 14 cistron operon are involved in the functional enzyme (PhnGHIJK).

Phosphonates are everywhere: household cleaners, antibiotics, the most common herbicide in the world, HIV drugs and coffe machine descalers can all be phosphonate based. The more we know about their breakdown the better.
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