New age of discovery for new proteins dawns

October 9, 2009
New age of discovery for new proteins dawns

(PhysOrg.com) -- We are on the brink of another new age of discovery- this time of countless new proteins, which could be used in a whole range of situations from medicine to industry, following the successful development of a new laboratory technique.

The new technique, a reactome array, is set to transform microbiological research. It is described for the first time today in the internationally prestigious journal Science (9.10.09) in a paper co-authored by Professor Peter Golyshin of Bangor University, along with research colleagues at universities in Spain and Germany.

The new technique pinpoints biochemical activity (metabolism) and energy exchange within the cell and identifies active proteins in individual microbes or communities of microbes, from any environment. It bridges a gap between an ever increasing genome or DNA sequencing dataset and understanding the specific functions of the genes.

"The last 15 years have seen dramatic strides in our knowledge through the development of DNA sequencing. This approach can provide a blueprint for the entire genetic make up of a single microbe or complex . We can easily describe and catalogue the elements that make the DNA sequence, that is, the genes. To identify their function, they usually have to be compared to existing databases of known gene function. In a sense, what currently happens is a comparison against already known genes and proteins.

Reactome Array takes a wholly different approach. The technique identifies the whole set of biochemical reactions and, importantly, captures and identifies the proteins actively involved in the cell's metabolism or energy exchange," explains Professor Peter Golyshin, Professor of Environmental Genomics at Bangor University.

As well as enabling us to have a better understanding of how the world around us functions at a microbial level, these yet to be discovered proteins could have applications in a whole range of situations from medicine or pharmaceuticals to industry to environmental control, from the development of cost effective medical diagnostic kits for particular diseases to the mining of interesting proteins from unusual and extreme microbial habitats where one could anticipate novel proteins for use in food production, cosmetics, agriculture and other industries.

More information: Reactome Array: Forging a Link Between Metabolome and Genome is published in Science, issue 9 October 2009

Provided by Bangor University (news : web)

Explore further: Scientists Expand Microbe 'Gene Language'

Related Stories

Scientists Expand Microbe 'Gene Language'

February 28, 2007

An international group of scientists has expanded the universal language for the genes of both disease-causing and beneficial microbes and their hosts. This expanded "lingua franca," called The Gene Ontology (GO), gives researchers ...

Bigelow laboratory scientists doach to study marine microbes

May 21, 2007

In a paper published this month in the Proceedings of the National Academy of Sciences, Dr. Ramunas Stepanauskas and Dr. Michael Sieracki have proven a new method of identifying genetic codes of ocean microbes from a single ...

Recommended for you

Brazilian wasp venom kills cancer cells by opening them up

September 1, 2015

The social wasp Polybia paulista protects itself against predators by producing venom known to contain a powerful cancer-fighting ingredient. A Biophysical Journal study published September 1 reveals exactly how the venom's ...

Water heals a bioplastic

September 1, 2015

A drop of water self-heals a multiphase polymer derived from the genetic code of squid ring teeth, which may someday extend the life of medical implants, fiber-optic cables and other hard to repair in place objects, according ...

Naturally-occurring protein enables slower-melting ice cream

August 31, 2015

(Phys.org)—Scientists have developed a slower-melting ice cream—consider the advantages the next time a hot summer day turns your child's cone with its dream-like mound of orange, vanilla and lemon swirls with chocolate ...

0 comments

Please sign in to add a comment. Registration is free, and takes less than a minute. Read more

Click here to reset your password.
Sign in to get notified via email when new comments are made.